Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.79■□□□□ 0.6
BRPF1P55201 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.79■□□□□ 0.6
BRPF1P55201 AC104306.2-201ENST00000451877 341 ntBASIC18.79■□□□□ 0.6
BRPF1P55201 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.79■□□□□ 0.6
BRPF1P55201 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.79■□□□□ 0.6
BRPF1P55201 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.79■□□□□ 0.6
BRPF1P55201 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
BRPF1P55201 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.79■□□□□ 0.6
BRPF1P55201 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.79■□□□□ 0.6
BRPF1P55201 AC152010.1-201ENST00000415779 2006 ntBASIC18.79■□□□□ 0.6
BRPF1P55201 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BRPF1P55201 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.79■□□□□ 0.6
BRPF1P55201 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRPF1P55201 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 AC138028.6-201ENST00000616106 1482 ntBASIC18.78■□□□□ 0.6
BRPF1P55201 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
BRPF1P55201 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.78■□□□□ 0.6
BRPF1P55201 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BRPF1P55201 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.78■□□□□ 0.6
BRPF1P55201 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC18.78■□□□□ 0.6
BRPF1P55201 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 AL354877.1-201ENST00000424412 413 ntBASIC18.78■□□□□ 0.6
BRPF1P55201 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.78■□□□□ 0.6
BRPF1P55201 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.78■□□□□ 0.6
BRPF1P55201 AL645933.1-201ENST00000440087 609 ntBASIC18.78■□□□□ 0.6
BRPF1P55201 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.78■□□□□ 0.6
BRPF1P55201 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.78■□□□□ 0.6
BRPF1P55201 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.78■□□□□ 0.6
BRPF1P55201 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.78■□□□□ 0.6
BRPF1P55201 AC027237.1-201ENST00000560942 655 ntBASIC18.78■□□□□ 0.6
BRPF1P55201 EEF1DP1-201ENST00000585891 896 ntBASIC18.78■□□□□ 0.6
BRPF1P55201 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.78■□□□□ 0.6
BRPF1P55201 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRPF1P55201 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
BRPF1P55201 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
BRPF1P55201 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
BRPF1P55201 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC18.77■□□□□ 0.6
BRPF1P55201 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 TSPY26P-202ENST00000565928 3884 ntBASIC18.77■□□□□ 0.6
BRPF1P55201 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.77■□□□□ 0.6
BRPF1P55201 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
BRPF1P55201 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.77■□□□□ 0.6
BRPF1P55201 AL157407.1-201ENST00000435784 904 ntBASIC18.77■□□□□ 0.6
BRPF1P55201 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.77■□□□□ 0.6
BRPF1P55201 RPS2P36-201ENST00000456516 831 ntBASIC18.77■□□□□ 0.6
BRPF1P55201 SCARNA20.5-201ENST00000516991 142 ntBASIC18.77■□□□□ 0.6
BRPF1P55201 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
BRPF1P55201 AC104506.1-201ENST00000609247 429 ntBASIC18.77■□□□□ 0.6
BRPF1P55201 AC128714.1-201ENST00000637035 887 ntBASIC18.77■□□□□ 0.6
BRPF1P55201 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.77■□□□□ 0.6
BRPF1P55201 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.77■□□□□ 0.6
BRPF1P55201 AC026748.1-201ENST00000624349 3251 ntBASIC18.77■□□□□ 0.6
BRPF1P55201 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
BRPF1P55201 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRPF1P55201 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.77■□□□□ 0.6
BRPF1P55201 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BRPF1P55201 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.77■□□□□ 0.59
BRPF1P55201 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRPF1P55201 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC18.77■□□□□ 0.59
BRPF1P55201 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BRPF1P55201 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms