Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 AC023794.5-201ENST00000564380 2157 ntBASIC14.15□□□□□ -0.14
NR1H2P55055 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.15□□□□□ -0.14
NR1H2P55055 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NR1H2P55055 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
NR1H2P55055 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.15□□□□□ -0.14
NR1H2P55055 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 GHSR-202ENST00000427970 912 ntBASIC14.15□□□□□ -0.14
NR1H2P55055 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 AP005018.1-201ENST00000525475 301 ntBASIC14.15□□□□□ -0.14
NR1H2P55055 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.15□□□□□ -0.14
NR1H2P55055 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.15□□□□□ -0.14
NR1H2P55055 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 AL589702.1-201ENST00000641229 1509 ntBASIC14.15□□□□□ -0.14
NR1H2P55055 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NR1H2P55055 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.15□□□□□ -0.14
NR1H2P55055 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
NR1H2P55055 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NR1H2P55055 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
NR1H2P55055 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NR1H2P55055 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.14□□□□□ -0.15
NR1H2P55055 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NR1H2P55055 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H2P55055 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.14□□□□□ -0.15
NR1H2P55055 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H2P55055 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.14□□□□□ -0.15
NR1H2P55055 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H2P55055 CRB3P1-201ENST00000449338 276 ntBASIC14.14□□□□□ -0.15
NR1H2P55055 SERBP1P3-201ENST00000459980 809 ntBASIC14.14□□□□□ -0.15
NR1H2P55055 SERBP1P5-201ENST00000510079 1181 ntBASIC14.14□□□□□ -0.15
NR1H2P55055 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H2P55055 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 TEX28P1-201ENST00000613479 1221 ntBASIC14.14□□□□□ -0.15
NR1H2P55055 TEX28P2-201ENST00000617764 1221 ntBASIC14.14□□□□□ -0.15
NR1H2P55055 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NR1H2P55055 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.14□□□□□ -0.15
NR1H2P55055 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H2P55055 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 INE2-201ENST00000630399 1874 ntBASIC14.14□□□□□ -0.15
NR1H2P55055 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H2P55055 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H2P55055 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
NR1H2P55055 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms