Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 RN7SL81P-201ENST00000493781 261 ntBASIC16.9■□□□□ 0.3
HMGCS2P54868 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.9■□□□□ 0.3
HMGCS2P54868 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGCS2P54868 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.9■□□□□ 0.3
HMGCS2P54868 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 AC073911.3-201ENST00000624401 631 ntBASIC16.9■□□□□ 0.3
HMGCS2P54868 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HMGCS2P54868 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCS2P54868 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.89■□□□□ 0.3
HMGCS2P54868 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.89■□□□□ 0.3
HMGCS2P54868 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCS2P54868 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCS2P54868 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
HMGCS2P54868 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCS2P54868 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS2P54868 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS2P54868 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HMGCS2P54868 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS2P54868 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS2P54868 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS2P54868 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCS2P54868 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS2P54868 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HMGCS2P54868 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.89■□□□□ 0.29
HMGCS2P54868 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.89■□□□□ 0.29
HMGCS2P54868 PIN4P1-201ENST00000451079 396 ntBASIC16.89■□□□□ 0.29
HMGCS2P54868 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.89■□□□□ 0.29
HMGCS2P54868 RN7SL277P-201ENST00000481521 288 ntBASIC16.89■□□□□ 0.29
HMGCS2P54868 ORAOV1P1-201ENST00000503108 395 ntBASIC16.89■□□□□ 0.29
HMGCS2P54868 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS2P54868 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS2P54868 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS2P54868 AP001184.1-201ENST00000637936 376 ntBASIC16.89■□□□□ 0.29
HMGCS2P54868 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS2P54868 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HMGCS2P54868 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS2P54868 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS2P54868 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS2P54868 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS2P54868 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
HMGCS2P54868 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS2P54868 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HMGCS2P54868 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HMGCS2P54868 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HMGCS2P54868 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HMGCS2P54868 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 HIST2H2BA-201ENST00000412169 381 ntBASIC16.88■□□□□ 0.29
HMGCS2P54868 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.88■□□□□ 0.29
HMGCS2P54868 TMCO5B-205ENST00000530020 894 ntBASIC16.88■□□□□ 0.29
HMGCS2P54868 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.88■□□□□ 0.29
HMGCS2P54868 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.88■□□□□ 0.29
HMGCS2P54868 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.88■□□□□ 0.29
HMGCS2P54868 MIR3180-2-201ENST00000581748 88 ntBASIC16.88■□□□□ 0.29
HMGCS2P54868 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.88■□□□□ 0.29
HMGCS2P54868 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.88■□□□□ 0.29
HMGCS2P54868 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.88■□□□□ 0.29
HMGCS2P54868 AP002353.1-201ENST00000528257 1599 ntBASIC16.88■□□□□ 0.29
HMGCS2P54868 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS2P54868 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS2P54868 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
HMGCS2P54868 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms