Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.39□□□□□ -0.11
PDX1P52945 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.39□□□□□ -0.11
PDX1P52945 AC007274.2-201ENST00000421675 662 ntBASIC14.39□□□□□ -0.11
PDX1P52945 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 AC104073.2-201ENST00000453737 312 ntBASIC14.39□□□□□ -0.11
PDX1P52945 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 RPS2P36-201ENST00000456516 831 ntBASIC14.39□□□□□ -0.11
PDX1P52945 TUBB8P8-201ENST00000458717 1058 ntBASIC14.39□□□□□ -0.11
PDX1P52945 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.39□□□□□ -0.11
PDX1P52945 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.39□□□□□ -0.11
PDX1P52945 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.39□□□□□ -0.11
PDX1P52945 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.39□□□□□ -0.11
PDX1P52945 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.39□□□□□ -0.11
PDX1P52945 AC005324.6-201ENST00000587972 613 ntBASIC14.39□□□□□ -0.11
PDX1P52945 AC138696.2-201ENST00000607376 223 ntBASIC14.39□□□□□ -0.11
PDX1P52945 AL136301.1-201ENST00000615830 422 ntBASIC14.39□□□□□ -0.11
PDX1P52945 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.39□□□□□ -0.11
PDX1P52945 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PDX1P52945 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.39□□□□□ -0.11
PDX1P52945 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.39□□□□□ -0.11
PDX1P52945 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.39□□□□□ -0.11
PDX1P52945 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDX1P52945 REXO1L4P-201ENST00000605109 1937 ntBASIC14.39□□□□□ -0.11
PDX1P52945 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 AC138969.2-201ENST00000532739 9932 ntBASIC14.38□□□□□ -0.11
PDX1P52945 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 AC068418.2-201ENST00000577309 3703 ntBASIC14.38□□□□□ -0.11
PDX1P52945 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.38□□□□□ -0.11
PDX1P52945 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.38□□□□□ -0.11
PDX1P52945 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.38□□□□□ -0.11
PDX1P52945 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.38□□□□□ -0.11
PDX1P52945 SPCS2P2-201ENST00000603270 608 ntBASIC14.38□□□□□ -0.11
PDX1P52945 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.38□□□□□ -0.11
PDX1P52945 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 AC002472.3-201ENST00000640124 621 ntBASIC14.38□□□□□ -0.11
PDX1P52945 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 ZBED1P1-201ENST00000502364 1930 ntBASIC14.38□□□□□ -0.11
PDX1P52945 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 E2F3P2-201ENST00000447755 1422 ntBASIC14.38□□□□□ -0.11
PDX1P52945 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDX1P52945 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.38□□□□□ -0.11
PDX1P52945 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.38□□□□□ -0.11
PDX1P52945 AL137783.1-201ENST00000623494 1896 ntBASIC14.38□□□□□ -0.11
PDX1P52945 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PDX1P52945 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms