Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
EFNA3P52797 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
EFNA3P52797 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
EFNA3P52797 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 AC004899.1-201ENST00000424687 1714 ntBASIC13.84□□□□□ -0.19
EFNA3P52797 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.84□□□□□ -0.19
EFNA3P52797 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
EFNA3P52797 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
EFNA3P52797 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
EFNA3P52797 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNA3P52797 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.83□□□□□ -0.2
EFNA3P52797 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.83□□□□□ -0.2
EFNA3P52797 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
EFNA3P52797 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 FNTAP2-201ENST00000430308 634 ntBASIC13.83□□□□□ -0.2
EFNA3P52797 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.83□□□□□ -0.2
EFNA3P52797 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.83□□□□□ -0.2
EFNA3P52797 RPL18P13-201ENST00000478088 569 ntBASIC13.83□□□□□ -0.2
EFNA3P52797 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.83□□□□□ -0.2
EFNA3P52797 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 AC100827.2-201ENST00000563214 1194 ntBASIC13.83□□□□□ -0.2
EFNA3P52797 MBLAC2-202ENST00000514906 1936 ntBASIC13.83□□□□□ -0.2
EFNA3P52797 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
EFNA3P52797 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.83□□□□□ -0.2
EFNA3P52797 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
EFNA3P52797 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNA3P52797 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNA3P52797 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNA3P52797 AL136172.1-201ENST00000598590 1394 ntBASIC13.83□□□□□ -0.2
EFNA3P52797 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
EFNA3P52797 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNA3P52797 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
EFNA3P52797 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNA3P52797 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNA3P52797 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
EFNA3P52797 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
EFNA3P52797 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
EFNA3P52797 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNA3P52797 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
EFNA3P52797 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
EFNA3P52797 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNA3P52797 AKR7A2P1-201ENST00000460134 915 ntBASIC13.82□□□□□ -0.2
EFNA3P52797 AC021723.1-201ENST00000486306 515 ntBASIC13.82□□□□□ -0.2
EFNA3P52797 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNA3P52797 AC008825.2-201ENST00000603374 718 ntBASIC13.82□□□□□ -0.2
EFNA3P52797 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNA3P52797 AC068587.8-201ENST00000641239 219 ntBASIC13.82□□□□□ -0.2
EFNA3P52797 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 AC092135.3-201ENST00000624151 1846 ntBASIC13.82□□□□□ -0.2
EFNA3P52797 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 MRPL37P1-201ENST00000592451 1337 ntBASIC13.82□□□□□ -0.2
EFNA3P52797 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
EFNA3P52797 AC136759.1-202ENST00000530858 2194 ntBASIC13.82□□□□□ -0.2
EFNA3P52797 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNA3P52797 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNA3P52797 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms