Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.27■□□□□ 0.2
CDK7P50613 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.27■□□□□ 0.2
CDK7P50613 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.27■□□□□ 0.2
CDK7P50613 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.27■□□□□ 0.2
CDK7P50613 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 AC084781.1-201ENST00000613737 656 ntBASIC16.27■□□□□ 0.2
CDK7P50613 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.27■□□□□ 0.2
CDK7P50613 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.27■□□□□ 0.2
CDK7P50613 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK7P50613 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDK7P50613 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK7P50613 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CDK7P50613 AC018629.1-201ENST00000623381 1736 ntBASIC16.27■□□□□ 0.19
CDK7P50613 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK7P50613 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK7P50613 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK7P50613 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDK7P50613 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
CDK7P50613 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.27■□□□□ 0.19
CDK7P50613 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDK7P50613 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.26■□□□□ 0.19
CDK7P50613 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK7P50613 TMBIM7P-202ENST00000641474 1516 ntBASIC16.26■□□□□ 0.19
CDK7P50613 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDK7P50613 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK7P50613 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK7P50613 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 FTH1P22-201ENST00000456305 520 ntBASIC16.26■□□□□ 0.19
CDK7P50613 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK7P50613 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 AC114947.1-202ENST00000514136 344 ntBASIC16.26■□□□□ 0.19
CDK7P50613 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CDK7P50613 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.26■□□□□ 0.19
CDK7P50613 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.26■□□□□ 0.19
CDK7P50613 AC005357.2-202ENST00000590507 1060 ntBASIC16.26■□□□□ 0.19
CDK7P50613 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.26■□□□□ 0.19
CDK7P50613 AC087392.5-201ENST00000612517 489 ntBASIC16.26■□□□□ 0.19
CDK7P50613 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDK7P50613 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDK7P50613 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 TNRC18P2-201ENST00000417666 2714 ntBASIC16.25■□□□□ 0.19
CDK7P50613 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDK7P50613 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.25■□□□□ 0.19
CDK7P50613 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.25■□□□□ 0.19
CDK7P50613 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.25■□□□□ 0.19
CDK7P50613 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CDK7P50613 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDK7P50613 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CDK7P50613 Z69890.1-201ENST00000382990 339 ntBASIC16.25■□□□□ 0.19
CDK7P50613 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.25■□□□□ 0.19
CDK7P50613 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.25■□□□□ 0.19
CDK7P50613 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.25■□□□□ 0.19
CDK7P50613 AL157792.1-201ENST00000488281 530 ntBASIC16.25■□□□□ 0.19
CDK7P50613 RN7SL81P-201ENST00000493781 261 ntBASIC16.25■□□□□ 0.19
CDK7P50613 MRPL22P1-201ENST00000505398 616 ntBASIC16.25■□□□□ 0.19
CDK7P50613 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDK7P50613 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDK7P50613 AC105137.3-201ENST00000617588 984 ntBASIC16.25■□□□□ 0.19
CDK7P50613 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
CDK7P50613 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK7P50613 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms