Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.22■□□□□ 0.19
CENPFP49454 AC138761.6-201ENST00000583997 1423 ntBASIC16.22■□□□□ 0.19
CENPFP49454 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 FKBP4P8-201ENST00000610931 1369 ntBASIC16.21■□□□□ 0.19
CENPFP49454 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 AC095040.1-201ENST00000513286 675 ntBASIC16.21■□□□□ 0.19
CENPFP49454 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.21■□□□□ 0.19
CENPFP49454 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC16.21■□□□□ 0.19
CENPFP49454 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 AL365203.3-201ENST00000609742 2057 ntBASIC16.21■□□□□ 0.19
CENPFP49454 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.21■□□□□ 0.19
CENPFP49454 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 SNORA57-201ENST00000383870 149 ntBASIC16.21■□□□□ 0.19
CENPFP49454 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.21■□□□□ 0.19
CENPFP49454 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.21■□□□□ 0.19
CENPFP49454 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.21■□□□□ 0.19
CENPFP49454 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CENPFP49454 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CENPFP49454 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CENPFP49454 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CENPFP49454 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CENPFP49454 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CENPFP49454 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CENPFP49454 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.21■□□□□ 0.18
CENPFP49454 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CENPFP49454 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.21■□□□□ 0.18
CENPFP49454 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.21■□□□□ 0.18
CENPFP49454 RN7SL173P-201ENST00000461853 292 ntBASIC16.21■□□□□ 0.18
CENPFP49454 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CENPFP49454 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.18
CENPFP49454 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CENPFP49454 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.21■□□□□ 0.18
CENPFP49454 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CENPFP49454 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CENPFP49454 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CENPFP49454 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
CENPFP49454 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 AC098657.1-201ENST00000416270 1135 ntBASIC16.2■□□□□ 0.18
CENPFP49454 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 AC006328.1-201ENST00000437571 379 ntBASIC16.2■□□□□ 0.18
CENPFP49454 AL035414.1-201ENST00000451327 857 ntBASIC16.2■□□□□ 0.18
CENPFP49454 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 OR51A9P-201ENST00000422578 911 ntBASIC16.2■□□□□ 0.18
CENPFP49454 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.2■□□□□ 0.18
CENPFP49454 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 ANKRD26P1-203ENST00000569528 966 ntBASIC16.2■□□□□ 0.18
CENPFP49454 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 HCG18-241ENST00000602290 821 ntTSL 2 BASIC16.2■□□□□ 0.18
CENPFP49454 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 AL162727.3-201ENST00000635661 2787 ntBASIC16.2■□□□□ 0.18
CENPFP49454 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.2■□□□□ 0.18
CENPFP49454 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CENPFP49454 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.19■□□□□ 0.18
CENPFP49454 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.19■□□□□ 0.18
CENPFP49454 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.19■□□□□ 0.18
CENPFP49454 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CENPFP49454 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms