Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
PCP4P48539 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 AP3B2-202ENST00000535348 3254 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 SDHAP2-201ENST00000455183 2001 ntBASIC9.66□□□□□ -0.86
PCP4P48539 PARP8-219ENST00000514067 2829 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
PCP4P48539 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
PCP4P48539 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 FUT2-202ENST00000425340 3111 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 HTR5A-AS1-201ENST00000395731 2703 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 ALS2CL-203ENST00000415953 3471 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
PCP4P48539 MET-201ENST00000318493 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 PSMD10-201ENST00000217958 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC9.66□□□□□ -0.86
PCP4P48539 MX2-201ENST00000330714 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 BCL2L13-215ENST00000611738 4817 ntTSL 4 BASIC9.66□□□□□ -0.86
PCP4P48539 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 CTAGE4-201ENST00000486333 2588 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
PCP4P48539 CTAGE8-201ENST00000487179 2588 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
PCP4P48539 LASP1-203ENST00000433206 4023 ntTSL 2 BASIC9.66□□□□□ -0.86
PCP4P48539 RIC3-203ENST00000343202 2929 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
PCP4P48539 DDC-213ENST00000617822 1809 ntTSL 3 BASIC9.66□□□□□ -0.86
PCP4P48539 PTK2B-203ENST00000397501 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 PIP4K2C-203ENST00000540759 2876 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
PCP4P48539 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 CXCL12-203ENST00000374429 3532 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 TMEM130-205ENST00000450876 3891 ntTSL 2 BASIC9.65□□□□□ -0.86
PCP4P48539 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC9.65□□□□□ -0.86
PCP4P48539 SLC22A8-203ENST00000430500 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC9.65□□□□□ -0.86
PCP4P48539 PLD2-205ENST00000572940 3391 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
PCP4P48539 FANCF-201ENST00000327470 4269 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
PCP4P48539 EPB42-201ENST00000300215 4553 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 ANKRD19P-201ENST00000338192 862 ntBASIC9.65□□□□□ -0.86
PCP4P48539 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC9.65□□□□□ -0.86
PCP4P48539 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC9.65□□□□□ -0.86
PCP4P48539 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC9.65□□□□□ -0.86
PCP4P48539 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 FAM124B-203ENST00000409685 2509 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
PCP4P48539 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 MUM1-214ENST00000591806 4067 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 MYO15A-203ENST00000418233 3411 ntTSL 2 BASIC9.65□□□□□ -0.86
PCP4P48539 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 SPECC1-205ENST00000395529 4971 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 QRSL1-201ENST00000369044 2158 ntTSL 2 BASIC9.65□□□□□ -0.86
PCP4P48539 PPRC1-202ENST00000370012 2163 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 LRRC8E-206ENST00000618098 3743 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
PCP4P48539 ZNF543-201ENST00000321545 3659 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 GALNT17-205ENST00000618959 3012 ntTSL 5 BASIC9.65□□□□□ -0.86
PCP4P48539 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCP4P48539 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PCP4P48539 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PCP4P48539 CR1L-203ENST00000508064 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PCP4P48539 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
PCP4P48539 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
PCP4P48539 KRT8P31-201ENST00000504812 1408 ntBASIC9.65□□□□□ -0.87
PCP4P48539 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC9.65□□□□□ -0.87
PCP4P48539 DHX40-201ENST00000251241 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 FLII-222ENST00000579294 3936 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 GRAMD4P3-201ENST00000621665 1669 ntBASIC9.64□□□□□ -0.87
PCP4P48539 OSBPL6-205ENST00000392505 3637 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
PCP4P48539 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 CISD1-201ENST00000333926 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 FGFR2-202ENST00000346997 2472 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
PCP4P48539 LINC01238-203ENST00000429456 2170 ntTSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 CDC37L1-201ENST00000381854 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 LINC00895-201ENST00000629028 1637 ntBASIC9.64□□□□□ -0.87
PCP4P48539 S100PBP-202ENST00000373475 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 LINC01600-201ENST00000624527 2434 ntTSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 AC064805.1-202ENST00000569279 3493 ntBASIC9.64□□□□□ -0.87
PCP4P48539 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 NT5C1B-RDH14-202ENST00000532967 2142 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 EIF3C-204ENST00000564243 2870 ntTSL 2 BASIC9.64□□□□□ -0.87
PCP4P48539 MINDY1-203ENST00000361936 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC9.64□□□□□ -0.87
PCP4P48539 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCP4P48539 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms