Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATP6V1AP38606 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP6V1AP38606 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
ATP6V1AP38606 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V1AP38606 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V1AP38606 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V1AP38606 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 FER1L4-210ENST00000615531 5998 ntBASIC18.61■□□□□ 0.57
ATP6V1AP38606 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 RN7SKP109-201ENST00000410592 316 ntBASIC18.61■□□□□ 0.57
ATP6V1AP38606 AL139008.1-201ENST00000437894 228 ntBASIC18.61■□□□□ 0.57
ATP6V1AP38606 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 AC007952.4-201ENST00000573866 637 ntBASIC18.61■□□□□ 0.57
ATP6V1AP38606 DRG2-220ENST00000583355 891 ntTSL 3 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATP6V1AP38606 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V1AP38606 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 ERP29P1-201ENST00000442902 706 ntBASIC18.6■□□□□ 0.57
ATP6V1AP38606 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 AC024293.1-201ENST00000467930 498 ntBASIC18.6■□□□□ 0.57
ATP6V1AP38606 RN7SL396P-201ENST00000471086 295 ntBASIC18.6■□□□□ 0.57
ATP6V1AP38606 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 TMBIM7P-203ENST00000641617 1718 ntBASIC18.6■□□□□ 0.57
ATP6V1AP38606 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V1AP38606 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V1AP38606 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms