Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SCNN1AP37088 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCNN1AP37088 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCNN1AP37088 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.32■□□□□ 0.04
SCNN1AP37088 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCNN1AP37088 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.32■□□□□ 0.04
SCNN1AP37088 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.32■□□□□ 0.04
SCNN1AP37088 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCNN1AP37088 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.32■□□□□ 0.04
SCNN1AP37088 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCNN1AP37088 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.32■□□□□ 0.04
SCNN1AP37088 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCNN1AP37088 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.32■□□□□ 0.04
SCNN1AP37088 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SCNN1AP37088 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.32■□□□□ 0.04
SCNN1AP37088 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCNN1AP37088 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SCNN1AP37088 AL009178.2-201ENST00000597278 2719 ntBASIC15.31■□□□□ 0.04
SCNN1AP37088 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.31■□□□□ 0.04
SCNN1AP37088 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.31■□□□□ 0.04
SCNN1AP37088 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SCNN1AP37088 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SCNN1AP37088 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 BTBD6P1-201ENST00000412176 1267 ntBASIC15.31■□□□□ 0.04
SCNN1AP37088 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.31■□□□□ 0.04
SCNN1AP37088 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.31■□□□□ 0.04
SCNN1AP37088 GOLGA2P4-201ENST00000441462 777 ntBASIC15.31■□□□□ 0.04
SCNN1AP37088 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.31■□□□□ 0.04
SCNN1AP37088 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SCNN1AP37088 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.31■□□□□ 0.04
SCNN1AP37088 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
SCNN1AP37088 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.31■□□□□ 0.04
SCNN1AP37088 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.31■□□□□ 0.04
SCNN1AP37088 AL023803.2-201ENST00000620080 638 ntBASIC15.31■□□□□ 0.04
SCNN1AP37088 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
SCNN1AP37088 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SCNN1AP37088 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.31■□□□□ 0.04
SCNN1AP37088 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.31■□□□□ 0.04
SCNN1AP37088 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.31■□□□□ 0.04
SCNN1AP37088 TCAM1P-207ENST00000485295 1537 ntBASIC15.31■□□□□ 0.04
SCNN1AP37088 REXO1L6P-201ENST00000603433 1515 ntBASIC15.31■□□□□ 0.04
SCNN1AP37088 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.31■□□□□ 0.04
SCNN1AP37088 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 AC011498.7-201ENST00000624986 2027 ntBASIC15.31■□□□□ 0.04
SCNN1AP37088 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCNN1AP37088 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCNN1AP37088 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SCNN1AP37088 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SCNN1AP37088 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SCNN1AP37088 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.3■□□□□ 0.04
SCNN1AP37088 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.3■□□□□ 0.04
SCNN1AP37088 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.3■□□□□ 0.04
SCNN1AP37088 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.3■□□□□ 0.04
SCNN1AP37088 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.3■□□□□ 0.04
SCNN1AP37088 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.3■□□□□ 0.04
SCNN1AP37088 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.3■□□□□ 0.04
SCNN1AP37088 RPL13AP20-201ENST00000459725 609 ntBASIC15.3■□□□□ 0.04
SCNN1AP37088 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.3■□□□□ 0.04
SCNN1AP37088 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.3■□□□□ 0.04
SCNN1AP37088 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.3■□□□□ 0.04
SCNN1AP37088 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.3■□□□□ 0.04
SCNN1AP37088 RBM8B-201ENST00000555532 525 ntBASIC15.3■□□□□ 0.04
SCNN1AP37088 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.3■□□□□ 0.04
SCNN1AP37088 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
SCNN1AP37088 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCNN1AP37088 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.3■□□□□ 0.04
SCNN1AP37088 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms