Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18■□□□□ 0.47
PDE6BP35913 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18■□□□□ 0.47
PDE6BP35913 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18■□□□□ 0.47
PDE6BP35913 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18■□□□□ 0.47
PDE6BP35913 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18■□□□□ 0.47
PDE6BP35913 SIGLEC22P-201ENST00000599104 714 ntBASIC18■□□□□ 0.47
PDE6BP35913 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18■□□□□ 0.47
PDE6BP35913 AC002044.2-201ENST00000624910 970 ntBASIC18■□□□□ 0.47
PDE6BP35913 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18■□□□□ 0.47
PDE6BP35913 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18■□□□□ 0.47
PDE6BP35913 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PDE6BP35913 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18■□□□□ 0.47
PDE6BP35913 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18■□□□□ 0.47
PDE6BP35913 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.99■□□□□ 0.47
PDE6BP35913 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.99■□□□□ 0.47
PDE6BP35913 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
PDE6BP35913 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.99■□□□□ 0.47
PDE6BP35913 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PDE6BP35913 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PDE6BP35913 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.99■□□□□ 0.47
PDE6BP35913 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 AC093909.3-201ENST00000504783 336 ntBASIC17.99■□□□□ 0.47
PDE6BP35913 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 FAM90A21P-201ENST00000510875 1396 ntBASIC17.99■□□□□ 0.47
PDE6BP35913 FAM90A15P-201ENST00000514465 1395 ntBASIC17.99■□□□□ 0.47
PDE6BP35913 FAM90A6P-201ENST00000515148 1394 ntBASIC17.99■□□□□ 0.47
PDE6BP35913 FAM90A16P-201ENST00000526662 1395 ntBASIC17.99■□□□□ 0.47
PDE6BP35913 FAM90A9P-201ENST00000527940 1395 ntBASIC17.99■□□□□ 0.47
PDE6BP35913 FAM90A5P-201ENST00000528738 1395 ntBASIC17.99■□□□□ 0.47
PDE6BP35913 FAM90A14P-201ENST00000530386 1395 ntBASIC17.99■□□□□ 0.47
PDE6BP35913 FAM90A13P-201ENST00000534703 1395 ntBASIC17.99■□□□□ 0.47
PDE6BP35913 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.99■□□□□ 0.47
PDE6BP35913 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDE6BP35913 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE6BP35913 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.98■□□□□ 0.47
PDE6BP35913 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6BP35913 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE6BP35913 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDE6BP35913 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDE6BP35913 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.98■□□□□ 0.47
PDE6BP35913 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.98■□□□□ 0.47
PDE6BP35913 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms