Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 TFAMP1-201ENST00000412727 736 ntBASIC10.95□□□□□ -0.66
CKS2P33552 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
CKS2P33552 SKP2-204ENST00000508514 821 ntTSL 3 BASIC10.95□□□□□ -0.66
CKS2P33552 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.95□□□□□ -0.66
CKS2P33552 AC018845.2-201ENST00000568326 409 ntBASIC10.95□□□□□ -0.66
CKS2P33552 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 SAMD11P1-201ENST00000571429 661 ntBASIC10.95□□□□□ -0.66
CKS2P33552 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CKS2P33552 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
CKS2P33552 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CKS2P33552 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.95□□□□□ -0.66
CKS2P33552 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CKS2P33552 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CKS2P33552 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 AL139385.1-201ENST00000611744 3272 ntBASIC10.94□□□□□ -0.66
CKS2P33552 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
CKS2P33552 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS2P33552 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS2P33552 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.94□□□□□ -0.66
CKS2P33552 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
CKS2P33552 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS2P33552 AL671277.1-201ENST00000429656 993 ntBASIC10.94□□□□□ -0.66
CKS2P33552 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 IGHV3-62-201ENST00000520057 340 ntBASIC10.94□□□□□ -0.66
CKS2P33552 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.94□□□□□ -0.66
CKS2P33552 FAM86C2P-203ENST00000528684 1004 ntBASIC10.94□□□□□ -0.66
CKS2P33552 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.94□□□□□ -0.66
CKS2P33552 AP000842.3-202ENST00000569238 1080 ntBASIC10.94□□□□□ -0.66
CKS2P33552 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.94□□□□□ -0.66
CKS2P33552 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.94□□□□□ -0.66
CKS2P33552 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.94□□□□□ -0.66
CKS2P33552 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CKS2P33552 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms