Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC022217.1-201ENST00000521069 738 ntBASIC15.13■□□□□ 0.01
SLC6A4P31645 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC6A4P31645 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC6A4P31645 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC6A4P31645 SNORD3B-2-202ENST00000571722 791 ntBASIC15.13■□□□□ 0.01
SLC6A4P31645 CYP4F23P-201ENST00000593402 1579 ntBASIC15.13■□□□□ 0.01
SLC6A4P31645 AC009884.2-201ENST00000603110 324 ntBASIC15.13■□□□□ 0.01
SLC6A4P31645 AL645939.5-201ENST00000606834 243 ntBASIC15.13■□□□□ 0.01
SLC6A4P31645 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC6A4P31645 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC6A4P31645 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC6A4P31645 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC6A4P31645 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC6A4P31645 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SLC6A4P31645 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 AC067930.6-201ENST00000623257 4947 ntBASIC15.13■□□□□ 0.01
SLC6A4P31645 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SLC6A4P31645 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A4P31645 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLC6A4P31645 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SLC6A4P31645 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC6A4P31645 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 AC006122.1-201ENST00000493323 440 ntBASIC15.12■□□□□ 0.01
SLC6A4P31645 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.12■□□□□ 0.01
SLC6A4P31645 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.12■□□□□ 0.01
SLC6A4P31645 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 AC144522.1-201ENST00000625111 1658 ntBASIC15.12■□□□□ 0.01
SLC6A4P31645 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC6A4P31645 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A4P31645 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A4P31645 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC6A4P31645 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms