Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HOXA6P31267 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.36□□□□□ -0.11
HOXA6P31267 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXA6P31267 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXA6P31267 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.35□□□□□ -0.11
HOXA6P31267 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HOXA6P31267 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 AGGF1P1-201ENST00000509500 2073 ntBASIC14.35□□□□□ -0.11
HOXA6P31267 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HOXA6P31267 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.35□□□□□ -0.11
HOXA6P31267 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.35□□□□□ -0.11
HOXA6P31267 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.35□□□□□ -0.11
HOXA6P31267 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.35□□□□□ -0.11
HOXA6P31267 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HOXA6P31267 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.35□□□□□ -0.11
HOXA6P31267 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.35□□□□□ -0.11
HOXA6P31267 RN7SL582P-201ENST00000491078 279 ntBASIC14.35□□□□□ -0.11
HOXA6P31267 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.35□□□□□ -0.11
HOXA6P31267 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.35□□□□□ -0.11
HOXA6P31267 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.35□□□□□ -0.11
HOXA6P31267 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.35□□□□□ -0.11
HOXA6P31267 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HOXA6P31267 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.35□□□□□ -0.11
HOXA6P31267 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HOXA6P31267 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.35□□□□□ -0.11
HOXA6P31267 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.35□□□□□ -0.11
HOXA6P31267 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HOXA6P31267 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HOXA6P31267 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
HOXA6P31267 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
HOXA6P31267 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HOXA6P31267 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HOXA6P31267 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HOXA6P31267 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXA6P31267 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HOXA6P31267 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXA6P31267 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HOXA6P31267 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 LAP3P2-201ENST00000454686 1454 ntBASIC14.34□□□□□ -0.11
HOXA6P31267 AC079328.2-201ENST00000561241 3354 ntBASIC14.34□□□□□ -0.11
HOXA6P31267 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXA6P31267 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXA6P31267 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 PGAM1P12-201ENST00000505622 748 ntBASIC14.34□□□□□ -0.11
HOXA6P31267 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXA6P31267 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.34□□□□□ -0.11
HOXA6P31267 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXA6P31267 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXA6P31267 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXA6P31267 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HOXA6P31267 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms