Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.19■□□□□ 0.34
COL4A5P29400 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.19■□□□□ 0.34
COL4A5P29400 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.19■□□□□ 0.34
COL4A5P29400 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 AC022080.1-201ENST00000366255 781 ntBASIC17.19■□□□□ 0.34
COL4A5P29400 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COL4A5P29400 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 PSAT1P2-201ENST00000426107 972 ntBASIC17.19■□□□□ 0.34
COL4A5P29400 AC023141.7-201ENST00000430646 407 ntBASIC17.19■□□□□ 0.34
COL4A5P29400 IFNWP2-201ENST00000431203 580 ntBASIC17.19■□□□□ 0.34
COL4A5P29400 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.19■□□□□ 0.34
COL4A5P29400 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.19■□□□□ 0.34
COL4A5P29400 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
COL4A5P29400 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.19■□□□□ 0.34
COL4A5P29400 AC104506.1-201ENST00000609247 429 ntBASIC17.19■□□□□ 0.34
COL4A5P29400 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.19■□□□□ 0.34
COL4A5P29400 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.19■□□□□ 0.34
COL4A5P29400 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A5P29400 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.19■□□□□ 0.34
COL4A5P29400 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.19■□□□□ 0.34
COL4A5P29400 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL4A5P29400 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL4A5P29400 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.18■□□□□ 0.34
COL4A5P29400 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.18■□□□□ 0.34
COL4A5P29400 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.18■□□□□ 0.34
COL4A5P29400 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 OR7E115P-201ENST00000382617 1024 ntBASIC17.18■□□□□ 0.34
COL4A5P29400 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.18■□□□□ 0.34
COL4A5P29400 AC092903.1-201ENST00000466506 262 ntBASIC17.18■□□□□ 0.34
COL4A5P29400 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.18■□□□□ 0.34
COL4A5P29400 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.18■□□□□ 0.34
COL4A5P29400 KNOP1P1-201ENST00000542108 989 ntBASIC17.18■□□□□ 0.34
COL4A5P29400 AC126755.5-201ENST00000622756 267 ntBASIC17.18■□□□□ 0.34
COL4A5P29400 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.18■□□□□ 0.34
COL4A5P29400 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.18■□□□□ 0.34
COL4A5P29400 FKBP4P8-201ENST00000610931 1369 ntBASIC17.18■□□□□ 0.34
COL4A5P29400 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
COL4A5P29400 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.18■□□□□ 0.34
COL4A5P29400 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COL4A5P29400 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
COL4A5P29400 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COL4A5P29400 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
COL4A5P29400 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.17■□□□□ 0.34
COL4A5P29400 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.17■□□□□ 0.34
COL4A5P29400 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
COL4A5P29400 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.17■□□□□ 0.34
COL4A5P29400 AL359091.4-201ENST00000610052 409 ntBASIC17.17■□□□□ 0.34
COL4A5P29400 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.17■□□□□ 0.34
COL4A5P29400 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
COL4A5P29400 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
COL4A5P29400 AC232323.1-201ENST00000540724 2099 ntBASIC17.17■□□□□ 0.34
COL4A5P29400 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.17■□□□□ 0.34
COL4A5P29400 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
COL4A5P29400 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
COL4A5P29400 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL4A5P29400 AC018442.1-201ENST00000421439 2061 ntBASIC17.17■□□□□ 0.34
COL4A5P29400 AC008894.3-201ENST00000624324 3103 ntBASIC17.17■□□□□ 0.34
COL4A5P29400 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A5P29400 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.16■□□□□ 0.34
COL4A5P29400 AL080243.1-201ENST00000423293 1060 ntBASIC17.16■□□□□ 0.34
COL4A5P29400 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.16■□□□□ 0.34
COL4A5P29400 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.16■□□□□ 0.34
COL4A5P29400 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.16■□□□□ 0.34
COL4A5P29400 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.16■□□□□ 0.34
COL4A5P29400 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A5P29400 AC018846.1-201ENST00000568231 183 ntBASIC17.16■□□□□ 0.34
COL4A5P29400 ANKRD26P1-203ENST00000569528 966 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms