Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
GABRB3P28472 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GABRB3P28472 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.67□□□□□ -0.06
GABRB3P28472 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
GABRB3P28472 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GABRB3P28472 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.67□□□□□ -0.06
GABRB3P28472 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.67□□□□□ -0.06
GABRB3P28472 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 AC005229.1-201ENST00000392885 409 ntBASIC14.67□□□□□ -0.06
GABRB3P28472 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GABRB3P28472 PUDPP3-201ENST00000445368 636 ntBASIC14.67□□□□□ -0.06
GABRB3P28472 AL590640.2-201ENST00000457038 527 ntBASIC14.67□□□□□ -0.06
GABRB3P28472 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.67□□□□□ -0.06
GABRB3P28472 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.67□□□□□ -0.06
GABRB3P28472 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.67□□□□□ -0.06
GABRB3P28472 SLC25A47P1-201ENST00000531577 414 ntBASIC14.67□□□□□ -0.06
GABRB3P28472 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.67□□□□□ -0.06
GABRB3P28472 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.67□□□□□ -0.06
GABRB3P28472 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.67□□□□□ -0.06
GABRB3P28472 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.67□□□□□ -0.06
GABRB3P28472 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GABRB3P28472 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GABRB3P28472 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GABRB3P28472 KRT8P24-201ENST00000560290 1559 ntBASIC14.67□□□□□ -0.06
GABRB3P28472 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GABRB3P28472 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
GABRB3P28472 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GABRB3P28472 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
GABRB3P28472 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GABRB3P28472 MYO15B-237ENST00000642007 4893 ntBASIC14.66□□□□□ -0.06
GABRB3P28472 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRB3P28472 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRB3P28472 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.66□□□□□ -0.06
GABRB3P28472 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
GABRB3P28472 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.66□□□□□ -0.06
GABRB3P28472 TPM3P8-201ENST00000330554 643 ntBASIC14.66□□□□□ -0.06
GABRB3P28472 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 AC098614.1-201ENST00000368528 745 ntBASIC14.66□□□□□ -0.06
GABRB3P28472 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
GABRB3P28472 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 RN7SL752P-201ENST00000463779 287 ntBASIC14.66□□□□□ -0.06
GABRB3P28472 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.66□□□□□ -0.06
GABRB3P28472 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GABRB3P28472 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.66□□□□□ -0.06
GABRB3P28472 SORD2P-201ENST00000558556 1069 ntBASIC14.66□□□□□ -0.06
GABRB3P28472 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.66□□□□□ -0.06
GABRB3P28472 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
GABRB3P28472 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GABRB3P28472 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.66□□□□□ -0.06
GABRB3P28472 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
GABRB3P28472 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms