Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMLP26374 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMLP26374 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMLP26374 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CHMLP26374 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMLP26374 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMLP26374 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHMLP26374 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHMLP26374 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMLP26374 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.78■□□□□ 0.44
CHMLP26374 RPL7P3-201ENST00000441388 714 ntBASIC17.78■□□□□ 0.44
CHMLP26374 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.78■□□□□ 0.44
CHMLP26374 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CHMLP26374 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.78■□□□□ 0.44
CHMLP26374 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.78■□□□□ 0.44
CHMLP26374 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMLP26374 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.78■□□□□ 0.44
CHMLP26374 AC012645.4-201ENST00000610691 1061 ntBASIC17.78■□□□□ 0.44
CHMLP26374 RHOXF1P1-202ENST00000635473 501 ntBASIC17.78■□□□□ 0.44
CHMLP26374 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMLP26374 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMLP26374 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMLP26374 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.78■□□□□ 0.44
CHMLP26374 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMLP26374 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHMLP26374 MST1P2-201ENST00000457982 2291 ntBASIC17.78■□□□□ 0.44
CHMLP26374 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMLP26374 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHMLP26374 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 AHCYP2-201ENST00000430630 1300 ntBASIC17.77■□□□□ 0.44
CHMLP26374 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHMLP26374 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 AC011474.4-201ENST00000623523 2076 ntBASIC17.77■□□□□ 0.44
CHMLP26374 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.77■□□□□ 0.44
CHMLP26374 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.77■□□□□ 0.44
CHMLP26374 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.77■□□□□ 0.44
CHMLP26374 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CHMLP26374 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.77■□□□□ 0.44
CHMLP26374 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMLP26374 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.77■□□□□ 0.44
CHMLP26374 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHMLP26374 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMLP26374 ZACNP1-201ENST00000612259 710 ntBASIC17.77■□□□□ 0.44
CHMLP26374 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.77■□□□□ 0.44
CHMLP26374 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMLP26374 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMLP26374 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms