Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BRAFP15056 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.31■□□□□ 0.04
BRAFP15056 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.31■□□□□ 0.04
BRAFP15056 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 AL354702.1-201ENST00000442006 1960 ntBASIC15.31■□□□□ 0.04
BRAFP15056 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 AL359183.1-201ENST00000623796 2132 ntBASIC15.31■□□□□ 0.04
BRAFP15056 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
BRAFP15056 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 AC098614.1-201ENST00000368528 745 ntBASIC15.31■□□□□ 0.04
BRAFP15056 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.31■□□□□ 0.04
BRAFP15056 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 AC092552.1-201ENST00000547243 906 ntBASIC15.31■□□□□ 0.04
BRAFP15056 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.31■□□□□ 0.04
BRAFP15056 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.31■□□□□ 0.04
BRAFP15056 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.31■□□□□ 0.04
BRAFP15056 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BRAFP15056 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 CU639417.3-201ENST00000624240 1404 ntBASIC15.31■□□□□ 0.04
BRAFP15056 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRAFP15056 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BRAFP15056 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
BRAFP15056 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BRAFP15056 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
BRAFP15056 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
BRAFP15056 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.3■□□□□ 0.04
BRAFP15056 FAM86LP-201ENST00000478302 853 ntBASIC15.3■□□□□ 0.04
BRAFP15056 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.3■□□□□ 0.04
BRAFP15056 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
BRAFP15056 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 CR383656.12-201ENST00000549567 513 ntBASIC15.3■□□□□ 0.04
BRAFP15056 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.3■□□□□ 0.04
BRAFP15056 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BRAFP15056 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.3■□□□□ 0.04
BRAFP15056 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
BRAFP15056 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
BRAFP15056 WFDC1-204ENST00000613603 549 ntBASIC15.3■□□□□ 0.04
BRAFP15056 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.3■□□□□ 0.04
BRAFP15056 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
BRAFP15056 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BRAFP15056 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
BRAFP15056 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms