Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
BMP4P12644 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
BMP4P12644 BEND3P3-201ENST00000611030 2440 ntBASIC13.71□□□□□ -0.22
BMP4P12644 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.71□□□□□ -0.22
BMP4P12644 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
BMP4P12644 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.71□□□□□ -0.22
BMP4P12644 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
BMP4P12644 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
BMP4P12644 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
BMP4P12644 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
BMP4P12644 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
BMP4P12644 AC016397.2-201ENST00000624848 1985 ntBASIC13.71□□□□□ -0.22
BMP4P12644 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
BMP4P12644 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 AL023775.1-201ENST00000454907 1746 ntBASIC13.7□□□□□ -0.22
BMP4P12644 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.7□□□□□ -0.22
BMP4P12644 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
BMP4P12644 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.7□□□□□ -0.22
BMP4P12644 AP006294.1-201ENST00000415407 339 ntBASIC13.7□□□□□ -0.22
BMP4P12644 NME2P1-201ENST00000426182 414 ntBASIC13.7□□□□□ -0.22
BMP4P12644 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.7□□□□□ -0.22
BMP4P12644 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.7□□□□□ -0.22
BMP4P12644 AC044860.1-202ENST00000559481 777 ntBASIC13.7□□□□□ -0.22
BMP4P12644 AC104794.3-201ENST00000566840 1248 ntBASIC13.7□□□□□ -0.22
BMP4P12644 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
BMP4P12644 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
BMP4P12644 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.7□□□□□ -0.22
BMP4P12644 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.7□□□□□ -0.22
BMP4P12644 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.7□□□□□ -0.22
BMP4P12644 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.7□□□□□ -0.22
BMP4P12644 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.7□□□□□ -0.22
BMP4P12644 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 AC055811.4-201ENST00000624039 1754 ntBASIC13.7□□□□□ -0.22
BMP4P12644 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
BMP4P12644 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
BMP4P12644 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
BMP4P12644 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BMP4P12644 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
BMP4P12644 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.69□□□□□ -0.22
BMP4P12644 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
BMP4P12644 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
BMP4P12644 CICP16-201ENST00000502609 2813 ntBASIC13.69□□□□□ -0.22
BMP4P12644 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.69□□□□□ -0.22
BMP4P12644 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
BMP4P12644 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.69□□□□□ -0.22
BMP4P12644 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 GK-202ENST00000378941 458 ntTSL 3 BASIC13.69□□□□□ -0.22
BMP4P12644 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BMP4P12644 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.69□□□□□ -0.22
BMP4P12644 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms