Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.25□□□□□ -0.13
SP9P0CG40 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.25□□□□□ -0.13
SP9P0CG40 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.25□□□□□ -0.13
SP9P0CG40 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.25□□□□□ -0.13
SP9P0CG40 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.25□□□□□ -0.13
SP9P0CG40 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.25□□□□□ -0.13
SP9P0CG40 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.25□□□□□ -0.13
SP9P0CG40 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SP9P0CG40 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP9P0CG40 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.25□□□□□ -0.13
SP9P0CG40 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SP9P0CG40 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP9P0CG40 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.25□□□□□ -0.13
SP9P0CG40 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP9P0CG40 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SP9P0CG40 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SP9P0CG40 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SP9P0CG40 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SP9P0CG40 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SP9P0CG40 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.24□□□□□ -0.13
SP9P0CG40 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.24□□□□□ -0.13
SP9P0CG40 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.24□□□□□ -0.13
SP9P0CG40 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.24□□□□□ -0.13
SP9P0CG40 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SP9P0CG40 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 AP000244.1-201ENST00000424582 201 ntBASIC14.24□□□□□ -0.13
SP9P0CG40 AC092896.1-201ENST00000465850 380 ntBASIC14.24□□□□□ -0.13
SP9P0CG40 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.24□□□□□ -0.13
SP9P0CG40 RN7SL147P-201ENST00000487345 298 ntBASIC14.24□□□□□ -0.13
SP9P0CG40 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.24□□□□□ -0.13
SP9P0CG40 URB1-AS1-201ENST00000534991 831 ntBASIC14.24□□□□□ -0.13
SP9P0CG40 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.24□□□□□ -0.13
SP9P0CG40 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 CES1P2-201ENST00000566467 1242 ntBASIC14.24□□□□□ -0.13
SP9P0CG40 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.24□□□□□ -0.13
SP9P0CG40 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.24□□□□□ -0.13
SP9P0CG40 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 CR392039.1-201ENST00000623217 204 ntBASIC14.24□□□□□ -0.13
SP9P0CG40 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SP9P0CG40 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SP9P0CG40 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.24□□□□□ -0.13
SP9P0CG40 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SP9P0CG40 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SP9P0CG40 AD000864.1-201ENST00000624076 2295 ntBASIC14.24□□□□□ -0.13
SP9P0CG40 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SP9P0CG40 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.23□□□□□ -0.13
SP9P0CG40 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SP9P0CG40 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.23□□□□□ -0.13
SP9P0CG40 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SP9P0CG40 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.23□□□□□ -0.13
SP9P0CG40 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.23□□□□□ -0.13
SP9P0CG40 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SP9P0CG40 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.23□□□□□ -0.13
SP9P0CG40 NRADDP-201ENST00000437305 691 ntBASIC14.23□□□□□ -0.13
SP9P0CG40 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms