Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.43□□□□□ -0.26
FREM3P0C091 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
FREM3P0C091 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
FREM3P0C091 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 KRT8P21-201ENST00000430398 1491 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
FREM3P0C091 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.42□□□□□ -0.26
FREM3P0C091 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.42□□□□□ -0.26
FREM3P0C091 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.42□□□□□ -0.26
FREM3P0C091 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 AC104982.3-201ENST00000581995 514 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.42□□□□□ -0.26
FREM3P0C091 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.42□□□□□ -0.26
FREM3P0C091 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
FREM3P0C091 LINC01230-201ENST00000625222 3017 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
FREM3P0C091 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.42□□□□□ -0.26
FREM3P0C091 AL590440.2-201ENST00000641973 1595 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.42□□□□□ -0.26
FREM3P0C091 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.42□□□□□ -0.26
FREM3P0C091 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
FREM3P0C091 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
FREM3P0C091 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
FREM3P0C091 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
FREM3P0C091 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 AC010141.1-201ENST00000411585 623 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.42□□□□□ -0.26
FREM3P0C091 MARK2P5-201ENST00000507649 634 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.42□□□□□ -0.26
FREM3P0C091 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.42□□□□□ -0.26
FREM3P0C091 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 AL451050.2-201ENST00000606967 682 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 AC244157.2-201ENST00000616239 1006 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
FREM3P0C091 AL023803.2-201ENST00000620080 638 ntBASIC13.42□□□□□ -0.26
FREM3P0C091 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FREM3P0C091 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
FREM3P0C091 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
FREM3P0C091 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.41□□□□□ -0.26
FREM3P0C091 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.41□□□□□ -0.26
FREM3P0C091 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
FREM3P0C091 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
FREM3P0C091 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.41□□□□□ -0.26
FREM3P0C091 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.41□□□□□ -0.26
FREM3P0C091 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
FREM3P0C091 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms