Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 INE2-201ENST00000630399 1874 ntBASIC13.66□□□□□ -0.22
THBS1P07996 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
THBS1P07996 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
THBS1P07996 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS1P07996 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 RN7SL752P-201ENST00000463779 287 ntBASIC13.66□□□□□ -0.22
THBS1P07996 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS1P07996 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS1P07996 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS1P07996 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS1P07996 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS1P07996 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS1P07996 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS1P07996 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS1P07996 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 FKBP4P6-201ENST00000457486 1332 ntBASIC13.65□□□□□ -0.22
THBS1P07996 AC139712.1-201ENST00000378256 1875 ntBASIC13.65□□□□□ -0.22
THBS1P07996 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 LINC01230-201ENST00000625222 3017 ntBASIC13.65□□□□□ -0.22
THBS1P07996 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 AC215219.1-201ENST00000400706 1817 ntBASIC13.65□□□□□ -0.22
THBS1P07996 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
THBS1P07996 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 AC011495.1-201ENST00000498085 584 ntBASIC13.65□□□□□ -0.22
THBS1P07996 IGHV3-71-201ENST00000523324 359 ntBASIC13.65□□□□□ -0.22
THBS1P07996 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.65□□□□□ -0.22
THBS1P07996 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.65□□□□□ -0.22
THBS1P07996 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
THBS1P07996 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
THBS1P07996 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.65□□□□□ -0.22
THBS1P07996 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 AC132938.2-201ENST00000579188 680 ntBASIC13.65□□□□□ -0.22
THBS1P07996 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.65□□□□□ -0.22
THBS1P07996 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 OR13I1P-201ENST00000609811 1264 ntBASIC13.65□□□□□ -0.22
THBS1P07996 AC132938.4-201ENST00000623835 848 ntBASIC13.65□□□□□ -0.22
THBS1P07996 AL591163.1-201ENST00000641757 987 ntBASIC13.65□□□□□ -0.22
THBS1P07996 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
THBS1P07996 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 AC020910.6-201ENST00000623084 1459 ntBASIC13.65□□□□□ -0.22
THBS1P07996 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
THBS1P07996 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 KHSRPP1-201ENST00000427983 1768 ntBASIC13.65□□□□□ -0.22
THBS1P07996 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.65□□□□□ -0.22
THBS1P07996 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS1P07996 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
THBS1P07996 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms