Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.9■□□□□ 0.62
COL5A2P05997 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COL5A2P05997 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.9■□□□□ 0.62
COL5A2P05997 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.9■□□□□ 0.62
COL5A2P05997 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 KRT8P43-201ENST00000406052 1458 ntBASIC18.9■□□□□ 0.62
COL5A2P05997 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 PIFO-201ENST00000369737 746 ntTSL 2 BASIC18.9■□□□□ 0.62
COL5A2P05997 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 OR7E115P-201ENST00000382617 1024 ntBASIC18.9■□□□□ 0.62
COL5A2P05997 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 RN7SL147P-201ENST00000487345 298 ntBASIC18.9■□□□□ 0.62
COL5A2P05997 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL5A2P05997 AC023968.2-201ENST00000560593 1049 ntBASIC18.9■□□□□ 0.62
COL5A2P05997 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC18.9■□□□□ 0.62
COL5A2P05997 NAV1-210ENST00000593583 726 ntBASIC18.9■□□□□ 0.62
COL5A2P05997 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC18.9■□□□□ 0.62
COL5A2P05997 COQ4-204ENST00000608951 781 ntTSL 2 BASIC18.9■□□□□ 0.62
COL5A2P05997 TP53-221ENST00000615910 1149 ntTSL 5 BASIC18.9■□□□□ 0.62
COL5A2P05997 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC18.9■□□□□ 0.62
COL5A2P05997 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.9■□□□□ 0.62
COL5A2P05997 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL5A2P05997 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COL5A2P05997 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
COL5A2P05997 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
COL5A2P05997 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
COL5A2P05997 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
COL5A2P05997 LINC00115-201ENST00000473798 1317 ntBASIC18.89■□□□□ 0.61
COL5A2P05997 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.89■□□□□ 0.61
COL5A2P05997 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
COL5A2P05997 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
COL5A2P05997 PSAT1P2-201ENST00000426107 972 ntBASIC18.89■□□□□ 0.61
COL5A2P05997 STK24P1-201ENST00000455035 1291 ntBASIC18.89■□□□□ 0.61
COL5A2P05997 RN7SKP155-201ENST00000516031 288 ntBASIC18.89■□□□□ 0.61
COL5A2P05997 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC18.89■□□□□ 0.61
COL5A2P05997 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
COL5A2P05997 AL009176.1-201ENST00000607876 650 ntBASIC18.89■□□□□ 0.61
COL5A2P05997 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COL5A2P05997 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.89■□□□□ 0.61
COL5A2P05997 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL5A2P05997 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC18.88■□□□□ 0.61
COL5A2P05997 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC18.88■□□□□ 0.61
COL5A2P05997 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.88■□□□□ 0.61
COL5A2P05997 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
COL5A2P05997 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
COL5A2P05997 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL5A2P05997 AC064801.2-201ENST00000625052 1303 ntBASIC18.88■□□□□ 0.61
COL5A2P05997 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.88■□□□□ 0.61
COL5A2P05997 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.88■□□□□ 0.61
COL5A2P05997 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.88■□□□□ 0.61
COL5A2P05997 RN7SL455P-201ENST00000580629 282 ntBASIC18.88■□□□□ 0.61
COL5A2P05997 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC18.88■□□□□ 0.61
COL5A2P05997 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC18.88■□□□□ 0.61
COL5A2P05997 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
COL5A2P05997 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
COL5A2P05997 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL5A2P05997 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL5A2P05997 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.87■□□□□ 0.61
COL5A2P05997 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL5A2P05997 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
COL5A2P05997 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.87■□□□□ 0.61
COL5A2P05997 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms