Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
POLR3DP05423 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR3DP05423 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.7■□□□□ 0.42
POLR3DP05423 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.7■□□□□ 0.42
POLR3DP05423 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.7■□□□□ 0.42
POLR3DP05423 NKAIN1P1-201ENST00000435754 582 ntBASIC17.7■□□□□ 0.42
POLR3DP05423 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.7■□□□□ 0.42
POLR3DP05423 SCARNA20.5-201ENST00000516991 142 ntBASIC17.7■□□□□ 0.42
POLR3DP05423 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR3DP05423 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.7■□□□□ 0.42
POLR3DP05423 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
POLR3DP05423 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 AL023803.2-201ENST00000620080 638 ntBASIC17.7■□□□□ 0.42
POLR3DP05423 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR3DP05423 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR3DP05423 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
POLR3DP05423 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
POLR3DP05423 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR3DP05423 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
POLR3DP05423 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR3DP05423 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
POLR3DP05423 AL009178.2-201ENST00000597278 2719 ntBASIC17.7■□□□□ 0.42
POLR3DP05423 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR3DP05423 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
POLR3DP05423 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
POLR3DP05423 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR3DP05423 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR3DP05423 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
POLR3DP05423 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR3DP05423 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR3DP05423 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
POLR3DP05423 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 SNX18-202ENST00000343017 3140 ntBASIC17.69■□□□□ 0.42
POLR3DP05423 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
POLR3DP05423 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
POLR3DP05423 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
POLR3DP05423 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR3DP05423 AC010141.1-201ENST00000411585 623 ntBASIC17.69■□□□□ 0.42
POLR3DP05423 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.69■□□□□ 0.42
POLR3DP05423 CALR4P-201ENST00000431943 946 ntBASIC17.69■□□□□ 0.42
POLR3DP05423 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR3DP05423 DUX4L46-201ENST00000566845 751 ntBASIC17.69■□□□□ 0.42
POLR3DP05423 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR3DP05423 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR3DP05423 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
POLR3DP05423 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR3DP05423 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
POLR3DP05423 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
POLR3DP05423 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR3DP05423 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR3DP05423 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
POLR3DP05423 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.68■□□□□ 0.42
POLR3DP05423 EIF4HP1-201ENST00000453115 687 ntBASIC17.68■□□□□ 0.42
POLR3DP05423 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR3DP05423 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.68■□□□□ 0.42
POLR3DP05423 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR3DP05423 MIR4783-201ENST00000580343 82 ntBASIC17.68■□□□□ 0.42
POLR3DP05423 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR3DP05423 AC009955.4-201ENST00000597192 544 ntBASIC17.68■□□□□ 0.42
POLR3DP05423 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.68■□□□□ 0.42
POLR3DP05423 AL162426.1-201ENST00000624141 743 ntBASIC17.68■□□□□ 0.42
POLR3DP05423 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR3DP05423 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
POLR3DP05423 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR3DP05423 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
POLR3DP05423 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms