Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC055876.2-201ENST00000531834 546 ntBASIC13.39□□□□□ -0.27
HLA-DQA2P01906 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 AC120045.2-201ENST00000567334 178 ntBASIC13.39□□□□□ -0.27
HLA-DQA2P01906 AC005498.2-205ENST00000593218 784 ntBASIC13.39□□□□□ -0.27
HLA-DQA2P01906 AC004790.1-201ENST00000612686 536 ntBASIC13.39□□□□□ -0.27
HLA-DQA2P01906 AL662799.1-202ENST00000614205 422 ntBASIC13.39□□□□□ -0.27
HLA-DQA2P01906 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.39□□□□□ -0.27
HLA-DQA2P01906 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AC022447.6-201ENST00000515522 438 ntBASIC13.38□□□□□ -0.27
HLA-DQA2P01906 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 KRT8P14-201ENST00000414254 1442 ntBASIC13.38□□□□□ -0.27
HLA-DQA2P01906 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HLA-DQA2P01906 AC055811.4-201ENST00000624039 1754 ntBASIC13.37□□□□□ -0.27
HLA-DQA2P01906 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DQA2P01906 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms