Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 OR2I1P-209ENST00000641730 5365 ntBASIC15.9■□□□□ 0.14
HLA-DRAP01903 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRAP01903 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DRAP01903 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRAP01903 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DRAP01903 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DRAP01903 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRAP01903 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRAP01903 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRAP01903 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DRAP01903 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
HLA-DRAP01903 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 MIR326-201ENST00000362220 95 ntBASIC15.89■□□□□ 0.13
HLA-DRAP01903 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 FAM21FP-201ENST00000426241 1131 ntBASIC15.89■□□□□ 0.13
HLA-DRAP01903 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 AC008825.2-201ENST00000603374 718 ntBASIC15.89■□□□□ 0.13
HLA-DRAP01903 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 MIR600HG-201ENST00000449175 5984 ntBASIC15.89■□□□□ 0.13
HLA-DRAP01903 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DRAP01903 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DRAP01903 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 KRT8P28-201ENST00000433288 1390 ntBASIC15.88■□□□□ 0.13
HLA-DRAP01903 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 E2F3P2-201ENST00000447755 1422 ntBASIC15.88■□□□□ 0.13
HLA-DRAP01903 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 AC026748.1-201ENST00000624349 3251 ntBASIC15.88■□□□□ 0.13
HLA-DRAP01903 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 EEF1DP1-201ENST00000585891 896 ntBASIC15.88■□□□□ 0.13
HLA-DRAP01903 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 AC010328.2-201ENST00000597698 1111 ntBASIC15.88■□□□□ 0.13
HLA-DRAP01903 AC027601.3-201ENST00000622907 509 ntBASIC15.88■□□□□ 0.13
HLA-DRAP01903 AC215219.1-201ENST00000400706 1817 ntBASIC15.88■□□□□ 0.13
HLA-DRAP01903 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DRAP01903 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DRAP01903 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DRAP01903 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms