Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 RN7SKP175-201ENST00000408472 289 ntBASIC15.23■□□□□ 0.03
MT-CO1P00395 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.23■□□□□ 0.03
MT-CO1P00395 HIST2H2BB-201ENST00000449108 381 ntBASIC15.23■□□□□ 0.03
MT-CO1P00395 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.23■□□□□ 0.03
MT-CO1P00395 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.23■□□□□ 0.03
MT-CO1P00395 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.23■□□□□ 0.03
MT-CO1P00395 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.23■□□□□ 0.03
MT-CO1P00395 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 EEF1DP1-201ENST00000585891 896 ntBASIC15.23■□□□□ 0.03
MT-CO1P00395 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.23■□□□□ 0.03
MT-CO1P00395 AC091271.1-201ENST00000611877 1162 ntBASIC15.23■□□□□ 0.03
MT-CO1P00395 ZACNP1-201ENST00000612259 710 ntBASIC15.23■□□□□ 0.03
MT-CO1P00395 MIR6869-201ENST00000619434 62 ntBASIC15.23■□□□□ 0.03
MT-CO1P00395 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
MT-CO1P00395 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-CO1P00395 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-CO1P00395 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 AC015818.8-201ENST00000587907 1519 ntBASIC15.22■□□□□ 0.03
MT-CO1P00395 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MT-CO1P00395 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-CO1P00395 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MT-CO1P00395 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MT-CO1P00395 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-CO1P00395 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
MT-CO1P00395 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MT-CO1P00395 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-CO1P00395 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-CO1P00395 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-CO1P00395 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.22■□□□□ 0.03
MT-CO1P00395 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-CO1P00395 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-CO1P00395 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-CO1P00395 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-CO1P00395 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-CO1P00395 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-CO1P00395 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-CO1P00395 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
MT-CO1P00395 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-CO1P00395 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MT-CO1P00395 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-CO1P00395 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-CO1P00395 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
MT-CO1P00395 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-CO1P00395 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-CO1P00395 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-CO1P00395 BTBD6P1-201ENST00000412176 1267 ntBASIC15.21■□□□□ 0.03
MT-CO1P00395 AC007969.1-201ENST00000433675 447 ntBASIC15.21■□□□□ 0.03
MT-CO1P00395 MTX1P1-201ENST00000440904 838 ntBASIC15.21■□□□□ 0.03
MT-CO1P00395 AC100850.1-201ENST00000506768 649 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms