Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.49□□□□□ -0.41
ABCA1O95477 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 YRDCP1-201ENST00000621419 643 ntBASIC12.49□□□□□ -0.41
ABCA1O95477 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.49□□□□□ -0.41
ABCA1O95477 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ABCA1O95477 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.49□□□□□ -0.41
ABCA1O95477 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.49□□□□□ -0.41
ABCA1O95477 AC104073.2-201ENST00000453737 312 ntBASIC12.49□□□□□ -0.41
ABCA1O95477 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.49□□□□□ -0.41
ABCA1O95477 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 RN7SL555P-201ENST00000584742 339 ntBASIC12.49□□□□□ -0.41
ABCA1O95477 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.49□□□□□ -0.41
ABCA1O95477 COX6A1P2-201ENST00000620597 330 ntBASIC12.49□□□□□ -0.41
ABCA1O95477 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.49□□□□□ -0.41
ABCA1O95477 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ABCA1O95477 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.49□□□□□ -0.41
ABCA1O95477 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ABCA1O95477 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ABCA1O95477 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ABCA1O95477 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.48□□□□□ -0.41
ABCA1O95477 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.48□□□□□ -0.41
ABCA1O95477 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.48□□□□□ -0.41
ABCA1O95477 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ABCA1O95477 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ABCA1O95477 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.48□□□□□ -0.41
ABCA1O95477 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ABCA1O95477 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.48□□□□□ -0.41
ABCA1O95477 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.48□□□□□ -0.41
ABCA1O95477 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.48□□□□□ -0.41
ABCA1O95477 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.48□□□□□ -0.41
ABCA1O95477 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ABCA1O95477 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
ABCA1O95477 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.48□□□□□ -0.41
ABCA1O95477 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.48□□□□□ -0.41
ABCA1O95477 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ABCA1O95477 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.48□□□□□ -0.41
ABCA1O95477 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ABCA1O95477 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.48□□□□□ -0.41
ABCA1O95477 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.48□□□□□ -0.41
ABCA1O95477 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.48□□□□□ -0.41
ABCA1O95477 AC125604.1-201ENST00000496255 707 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms