Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
OPHN1O60890 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
OPHN1O60890 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
OPHN1O60890 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
OPHN1O60890 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.56■□□□□ 0.08
OPHN1O60890 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.55■□□□□ 0.08
OPHN1O60890 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
OPHN1O60890 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
OPHN1O60890 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.55■□□□□ 0.08
OPHN1O60890 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
OPHN1O60890 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.55■□□□□ 0.08
OPHN1O60890 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
OPHN1O60890 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.55■□□□□ 0.08
OPHN1O60890 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.55■□□□□ 0.08
OPHN1O60890 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.55■□□□□ 0.08
OPHN1O60890 RN7SL560P-201ENST00000577943 264 ntBASIC15.55■□□□□ 0.08
OPHN1O60890 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.55■□□□□ 0.08
OPHN1O60890 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.55■□□□□ 0.08
OPHN1O60890 AC091271.1-201ENST00000611877 1162 ntBASIC15.55■□□□□ 0.08
OPHN1O60890 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.55■□□□□ 0.08
OPHN1O60890 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
OPHN1O60890 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.55■□□□□ 0.08
OPHN1O60890 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
OPHN1O60890 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
OPHN1O60890 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.55■□□□□ 0.08
OPHN1O60890 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.55■□□□□ 0.08
OPHN1O60890 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
OPHN1O60890 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.55■□□□□ 0.08
OPHN1O60890 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 AC018529.2-202ENST00000611482 3087 ntBASIC15.54■□□□□ 0.08
OPHN1O60890 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
OPHN1O60890 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
OPHN1O60890 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
OPHN1O60890 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 AC140479.7-201ENST00000636301 2332 ntBASIC15.54■□□□□ 0.08
OPHN1O60890 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.54■□□□□ 0.08
OPHN1O60890 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 C1QBPP1-201ENST00000400117 770 ntBASIC15.54■□□□□ 0.08
OPHN1O60890 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.54■□□□□ 0.08
OPHN1O60890 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.54■□□□□ 0.08
OPHN1O60890 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
OPHN1O60890 AC120045.2-201ENST00000567334 178 ntBASIC15.54■□□□□ 0.08
OPHN1O60890 AC124283.3-201ENST00000570869 594 ntBASIC15.54■□□□□ 0.08
OPHN1O60890 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.54■□□□□ 0.08
OPHN1O60890 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.54■□□□□ 0.08
OPHN1O60890 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.54■□□□□ 0.08
OPHN1O60890 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms