Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HCN1O60741 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.94□□□□□ -0.18
HCN1O60741 FO681548.1-201ENST00000455617 1132 ntBASIC13.94□□□□□ -0.18
HCN1O60741 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.94□□□□□ -0.18
HCN1O60741 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.94□□□□□ -0.18
HCN1O60741 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
HCN1O60741 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
HCN1O60741 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
HCN1O60741 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 MIR4259-201ENST00000584466 101 ntBASIC13.94□□□□□ -0.18
HCN1O60741 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.94□□□□□ -0.18
HCN1O60741 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HCN1O60741 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.94□□□□□ -0.18
HCN1O60741 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 AC087386.2-201ENST00000623212 4637 ntBASIC13.94□□□□□ -0.18
HCN1O60741 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 INTS4P1-203ENST00000641008 3683 ntBASIC13.93□□□□□ -0.18
HCN1O60741 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.93□□□□□ -0.18
HCN1O60741 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HCN1O60741 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HCN1O60741 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HCN1O60741 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HCN1O60741 ANKRD19P-201ENST00000338192 862 ntBASIC13.93□□□□□ -0.18
HCN1O60741 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HCN1O60741 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HCN1O60741 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.93□□□□□ -0.18
HCN1O60741 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.93□□□□□ -0.18
HCN1O60741 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.93□□□□□ -0.18
HCN1O60741 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HCN1O60741 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 AC136759.1-202ENST00000530858 2194 ntBASIC13.93□□□□□ -0.18
HCN1O60741 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.93□□□□□ -0.18
HCN1O60741 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.93□□□□□ -0.18
HCN1O60741 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HCN1O60741 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.93□□□□□ -0.18
HCN1O60741 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HCN1O60741 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.93□□□□□ -0.18
HCN1O60741 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 AC007787.1-201ENST00000588095 1583 ntBASIC13.92□□□□□ -0.18
HCN1O60741 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.92□□□□□ -0.18
HCN1O60741 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HCN1O60741 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms