Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DENRO43583 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DENRO43583 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DENRO43583 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.69□□□□□ -0.22
DENRO43583 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DENRO43583 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
DENRO43583 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DENRO43583 AL445250.1-201ENST00000641671 2259 ntBASIC13.69□□□□□ -0.22
DENRO43583 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DENRO43583 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DENRO43583 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.68□□□□□ -0.22
DENRO43583 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 AKAP8P1-201ENST00000434743 1349 ntBASIC13.68□□□□□ -0.22
DENRO43583 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.68□□□□□ -0.22
DENRO43583 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
DENRO43583 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
DENRO43583 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 AC025580.3-201ENST00000617932 1424 ntBASIC13.68□□□□□ -0.22
DENRO43583 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.68□□□□□ -0.22
DENRO43583 AC002056.1-201ENST00000395613 760 ntBASIC13.68□□□□□ -0.22
DENRO43583 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.68□□□□□ -0.22
DENRO43583 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.68□□□□□ -0.22
DENRO43583 UNC93B6-202ENST00000528242 690 ntBASIC13.68□□□□□ -0.22
DENRO43583 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.68□□□□□ -0.22
DENRO43583 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 AC099522.2-201ENST00000607001 744 ntBASIC13.68□□□□□ -0.22
DENRO43583 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DENRO43583 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.68□□□□□ -0.22
DENRO43583 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
DENRO43583 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.68□□□□□ -0.22
DENRO43583 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.68□□□□□ -0.22
DENRO43583 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DENRO43583 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DENRO43583 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DENRO43583 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.67□□□□□ -0.22
DENRO43583 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
DENRO43583 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.67□□□□□ -0.22
DENRO43583 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 PI4KAP2-201ENST00000360806 2080 ntBASIC13.67□□□□□ -0.22
DENRO43583 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.67□□□□□ -0.22
DENRO43583 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DENRO43583 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.67□□□□□ -0.22
DENRO43583 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DENRO43583 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
DENRO43583 HNRNPDP1-201ENST00000439535 754 ntBASIC13.67□□□□□ -0.22
DENRO43583 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.67□□□□□ -0.22
DENRO43583 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.67□□□□□ -0.22
DENRO43583 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.67□□□□□ -0.22
DENRO43583 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
DENRO43583 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.67□□□□□ -0.22
DENRO43583 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.67□□□□□ -0.22
DENRO43583 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.67□□□□□ -0.22
DENRO43583 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DENRO43583 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.67□□□□□ -0.22
DENRO43583 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.67□□□□□ -0.22
DENRO43583 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms