Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC012044.1-201ENST00000603431 297 ntBASIC16.88■□□□□ 0.29
ATP2A1O14983 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
ATP2A1O14983 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 KRT8P28-201ENST00000433288 1390 ntBASIC16.88■□□□□ 0.29
ATP2A1O14983 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 AC097376.2-205ENST00000610159 5334 ntBASIC16.88■□□□□ 0.29
ATP2A1O14983 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ATP2A1O14983 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP2A1O14983 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 AC009093.10-201ENST00000641956 1442 ntBASIC16.87■□□□□ 0.29
ATP2A1O14983 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATP2A1O14983 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 AC103702.1-201ENST00000548801 2630 ntBASIC16.87■□□□□ 0.29
ATP2A1O14983 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A1O14983 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ATP2A1O14983 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A1O14983 AC092135.3-201ENST00000624151 1846 ntBASIC16.87■□□□□ 0.29
ATP2A1O14983 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATP2A1O14983 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP2A1O14983 RPS2P36-201ENST00000456516 831 ntBASIC16.87■□□□□ 0.29
ATP2A1O14983 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP2A1O14983 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP2A1O14983 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.87■□□□□ 0.29
ATP2A1O14983 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 MIR3188-201ENST00000583494 85 ntBASIC16.87■□□□□ 0.29
ATP2A1O14983 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
ATP2A1O14983 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.87■□□□□ 0.29
ATP2A1O14983 AC092384.3-202ENST00000564646 2873 ntBASIC16.87■□□□□ 0.29
ATP2A1O14983 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
ATP2A1O14983 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.87■□□□□ 0.29
ATP2A1O14983 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 PPT1-215ENST00000641471 2368 ntBASIC16.87■□□□□ 0.29
ATP2A1O14983 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.87■□□□□ 0.29
ATP2A1O14983 AC138035.3-201ENST00000622706 2791 ntBASIC16.87■□□□□ 0.29
ATP2A1O14983 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 AL109954.1-202ENST00000564051 2148 ntBASIC16.87■□□□□ 0.29
ATP2A1O14983 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATP2A1O14983 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ATP2A1O14983 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATP2A1O14983 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.86■□□□□ 0.29
ATP2A1O14983 AC019193.1-201ENST00000506678 823 ntBASIC16.86■□□□□ 0.29
ATP2A1O14983 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.86■□□□□ 0.29
ATP2A1O14983 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.86■□□□□ 0.29
ATP2A1O14983 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ATP2A1O14983 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.86■□□□□ 0.29
ATP2A1O14983 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.86■□□□□ 0.29
ATP2A1O14983 MEG3_2.1-201ENST00000611456 105 ntBASIC16.86■□□□□ 0.29
ATP2A1O14983 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms