Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
O00370 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.81■□□□□ 0.12
O00370 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 AC099336.1-201ENST00000417053 1171 ntBASIC15.81■□□□□ 0.12
O00370 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.81■□□□□ 0.12
O00370 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.81■□□□□ 0.12
O00370 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.81■□□□□ 0.12
O00370 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.81■□□□□ 0.12
O00370 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.81■□□□□ 0.12
O00370 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.81■□□□□ 0.12
O00370 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.81■□□□□ 0.12
O00370 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.81■□□□□ 0.12
O00370 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.81■□□□□ 0.12
O00370 AC079316.1-201ENST00000548397 411 ntBASIC15.81■□□□□ 0.12
O00370 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.81■□□□□ 0.12
O00370 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.81■□□□□ 0.12
O00370 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.81■□□□□ 0.12
O00370 AC017083.2-201ENST00000608069 979 ntBASIC15.81■□□□□ 0.12
O00370 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.81■□□□□ 0.12
O00370 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.81■□□□□ 0.12
O00370 OR2I1P-209ENST00000641730 5365 ntBASIC15.81■□□□□ 0.12
O00370 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
O00370 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
O00370 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
O00370 AC005252.3-201ENST00000623855 2258 ntBASIC15.8■□□□□ 0.12
O00370 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
O00370 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.8■□□□□ 0.12
O00370 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
O00370 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.8■□□□□ 0.12
O00370 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.8■□□□□ 0.12
O00370 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.8■□□□□ 0.12
O00370 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.8■□□□□ 0.12
O00370 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.8■□□□□ 0.12
O00370 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.8■□□□□ 0.12
O00370 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.8■□□□□ 0.12
O00370 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.8■□□□□ 0.12
O00370 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.8■□□□□ 0.12
O00370 AP005482.1-201ENST00000563722 1273 ntBASIC15.8■□□□□ 0.12
O00370 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.8■□□□□ 0.12
O00370 COX11-210ENST00000639671 696 ntBASIC15.8■□□□□ 0.12
O00370 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
O00370 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 AL354702.1-201ENST00000442006 1960 ntBASIC15.8■□□□□ 0.12
O00370 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
O00370 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.8■□□□□ 0.12
O00370 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
O00370 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
O00370 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 AC027601.5-201ENST00000624065 2482 ntBASIC15.79■□□□□ 0.12
O00370 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
O00370 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms