Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 AC004466.1-201ENST00000599515 1080 ntBASIC14.05□□□□□ -0.16
UPK1AO00322 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.05□□□□□ -0.16
UPK1AO00322 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UPK1AO00322 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UPK1AO00322 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UPK1AO00322 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.05□□□□□ -0.16
UPK1AO00322 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UPK1AO00322 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 AC023794.5-201ENST00000564380 2157 ntBASIC14.05□□□□□ -0.16
UPK1AO00322 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1AO00322 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
UPK1AO00322 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 RN7SL837P-201ENST00000463010 287 ntBASIC14.04□□□□□ -0.16
UPK1AO00322 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 AC068587.3-201ENST00000526613 355 ntBASIC14.04□□□□□ -0.16
UPK1AO00322 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 MIR3197-201ENST00000582241 73 ntBASIC14.04□□□□□ -0.16
UPK1AO00322 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 AC145423.3-201ENST00000615987 467 ntBASIC14.04□□□□□ -0.16
UPK1AO00322 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
UPK1AO00322 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
UPK1AO00322 AC020910.6-201ENST00000623084 1459 ntBASIC14.04□□□□□ -0.16
UPK1AO00322 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UPK1AO00322 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1AO00322 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK1AO00322 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
UPK1AO00322 AL161772.1-201ENST00000610494 4412 ntBASIC14.03□□□□□ -0.16
UPK1AO00322 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK1AO00322 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
UPK1AO00322 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UPK1AO00322 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms