Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.06□□□□□ -0.32
NPIPB4C9JG80 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 TMEM198B-204ENST00000484016 896 ntBASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 AC005225.4-201ENST00000557330 545 ntBASIC13.05□□□□□ -0.32
NPIPB4C9JG80 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PPY2P-201ENST00000582808 702 ntBASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 AC105233.6-201ENST00000642093 218 ntBASIC13.05□□□□□ -0.32
NPIPB4C9JG80 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 AC012617.1-204ENST00000586340 2305 ntBASIC13.05□□□□□ -0.32
NPIPB4C9JG80 AC015656.1-201ENST00000624209 3578 ntBASIC13.05□□□□□ -0.32
NPIPB4C9JG80 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
NPIPB4C9JG80 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPB4C9JG80 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms