Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 MIR6727-201ENST00000620702 65 ntBASIC21.48■■□□□ 1.03
HFM1A2PYH4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 AC012617.1-204ENST00000586340 2305 ntBASIC21.48■■□□□ 1.03
HFM1A2PYH4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC21.48■■□□□ 1.03
HFM1A2PYH4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HFM1A2PYH4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 AC091046.1-201ENST00000331871 207 ntBASIC21.47■■□□□ 1.03
HFM1A2PYH4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 OR8T1P-201ENST00000421347 918 ntBASIC21.47■■□□□ 1.03
HFM1A2PYH4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 MIR3907-201ENST00000579424 151 ntBASIC21.47■■□□□ 1.03
HFM1A2PYH4 AC012044.1-201ENST00000603431 297 ntBASIC21.47■■□□□ 1.03
HFM1A2PYH4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 LINC01815-202ENST00000641468 1409 ntBASIC21.47■■□□□ 1.03
HFM1A2PYH4 AC020910.6-201ENST00000623084 1459 ntBASIC21.47■■□□□ 1.03
HFM1A2PYH4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 FAM45BP-202ENST00000592932 1624 ntBASIC21.47■■□□□ 1.03
HFM1A2PYH4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 AC005912.2-201ENST00000619492 2400 ntBASIC21.47■■□□□ 1.03
HFM1A2PYH4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC21.47■■□□□ 1.03
HFM1A2PYH4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HFM1A2PYH4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 MPRIPP1-201ENST00000452433 1089 ntBASIC21.46■■□□□ 1.03
HFM1A2PYH4 RPS2P36-201ENST00000456516 831 ntBASIC21.46■■□□□ 1.03
HFM1A2PYH4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 KRT8P1-201ENST00000557533 1207 ntBASIC21.46■■□□□ 1.03
HFM1A2PYH4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 CAP2P1-201ENST00000557743 1390 ntBASIC21.46■■□□□ 1.03
HFM1A2PYH4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 TBC1D3J-201ENST00000620719 1426 ntBASIC21.46■■□□□ 1.03
HFM1A2PYH4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HFM1A2PYH4 HLA-DQB2-229ENST00000411527 1059 ntBASIC21.46■■□□□ 1.03
HFM1A2PYH4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 AC140658.4-201ENST00000561990 352 ntBASIC21.46■■□□□ 1.03
HFM1A2PYH4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
HFM1A2PYH4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC21.45■■□□□ 1.03
HFM1A2PYH4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
HFM1A2PYH4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC21.45■■□□□ 1.03
HFM1A2PYH4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
HFM1A2PYH4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC21.45■■□□□ 1.03
HFM1A2PYH4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
HFM1A2PYH4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms