Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 CICP16-201ENST00000502609 2813 ntBASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DUXBA0A1W2PPF3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 TUBB8P4-201ENST00000511806 1324 ntBASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 HSPA8P5-201ENST00000456928 2069 ntBASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 ZNF890P-202ENST00000530367 1156 ntBASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 AL512356.2-201ENST00000546955 174 ntBASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 TEX28P1-201ENST00000613479 1221 ntBASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 TEX28P2-201ENST00000617764 1221 ntBASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 FAM90A12P-201ENST00000519497 2375 ntBASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 FAM90A24P-201ENST00000520792 2369 ntBASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DUXBA0A1W2PPF3 DRD5P1-201ENST00000456605 1438 ntBASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
DUXBA0A1W2PPF3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms