Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 NUS1P3-201ENST00000423502 862 ntBASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 AC124283.3-201ENST00000570869 594 ntBASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 KRT8P22-201ENST00000562317 1415 ntBASIC13.05□□□□□ -0.32
RHBDD3Q9Y3P4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 MBLAC2-202ENST00000514906 1936 ntBASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AC236430.1-201ENST00000402231 743 ntBASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 SOCS2P1-201ENST00000417727 557 ntBASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AC002472.2-201ENST00000442739 958 ntBASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 TMEM261P1-201ENST00000604899 340 ntBASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 PRSS30P-206ENST00000641773 873 ntBASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AC011474.4-201ENST00000623523 2076 ntBASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AC018665.1-201ENST00000622927 1362 ntBASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RHBDD3Q9Y3P4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms