Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 AC236430.1-201ENST00000402231 743 ntBASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 FO681548.1-201ENST00000455617 1132 ntBASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 WASH4P-201ENST00000564273 1246 ntBASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 MYADML-201ENST00000474610 2147 ntBASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIF3AQ9Y2N7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 AC006504.5-208ENST00000588784 2401 ntBASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 RN7SKP230-201ENST00000365642 335 ntBASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 AL033527.5-201ENST00000641382 801 ntBASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 AC090505.1-201ENST00000430515 1834 ntBASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HIF3AQ9Y2N7 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIF3AQ9Y2N7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIF3AQ9Y2N7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIF3AQ9Y2N7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIF3AQ9Y2N7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIF3AQ9Y2N7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HIF3AQ9Y2N7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIF3AQ9Y2N7 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms