Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 RN7SL720P-201ENST00000488178 304 ntBASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 RN7SL774P-201ENST00000577467 290 ntBASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 AC005324.6-201ENST00000587972 613 ntBASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 AL358472.3-201ENST00000608147 415 ntBASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 AP003680.1-201ENST00000598970 3660 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 RNMTL1P1-201ENST00000454103 560 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 AC016629.1-201ENST00000596579 586 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 AL645939.5-201ENST00000606834 243 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 AC026740.1-201ENST00000607068 791 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 AC138696.2-201ENST00000607376 223 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 AL162426.1-201ENST00000624141 743 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 AL805961.1-203ENST00000641078 1258 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 SHC1P1-201ENST00000425230 1745 ntBASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SSX2IPQ9Y2D8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SSX2IPQ9Y2D8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SSX2IPQ9Y2D8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.96■□□□□ 0.14
SSX2IPQ9Y2D8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SSX2IPQ9Y2D8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms