Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.83■□□□□ 0.29
SYNPO2Q9UMS6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.83■□□□□ 0.29
SYNPO2Q9UMS6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
SYNPO2Q9UMS6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SYNPO2Q9UMS6 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 AC009560.1-201ENST00000620208 434 ntBASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 CICP14-201ENST00000629111 2732 ntBASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
SYNPO2Q9UMS6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 OR2K2-202ENST00000374428 1038 ntBASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 HINT2P1-201ENST00000419438 481 ntBASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPO2Q9UMS6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.81■□□□□ 0.28
SYNPO2Q9UMS6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms