Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 AC107375.1-201ENST00000564464 2231 ntBASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
UBQLN2Q9UHD9 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 BX842568.4-201ENST00000421222 227 ntBASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 FAM185BP-201ENST00000443595 716 ntBASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 PGAM5P1-201ENST00000518923 814 ntBASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 AC002347.1-201ENST00000569543 541 ntBASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 POM121L14P-201ENST00000406100 1558 ntBASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
UBQLN2Q9UHD9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 HCG4-201ENST00000418983 998 ntBASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBQLN2Q9UHD9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms