Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 CRB3P1-201ENST00000449338 276 ntBASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 RN7SL399P-201ENST00000471648 279 ntBASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 AC190387.1-201ENST00000551683 408 ntBASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
LIN7CQ9NUP9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
LIN7CQ9NUP9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.4□□□□□ -0.43
LIN7CQ9NUP9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
LIN7CQ9NUP9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LIN7CQ9NUP9 AL354702.1-201ENST00000442006 1960 ntBASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 AL157414.3-201ENST00000624276 1954 ntBASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 AC011474.4-201ENST00000623523 2076 ntBASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 KRT8P22-201ENST00000562317 1415 ntBASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 FAM86LP-201ENST00000478302 853 ntBASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 AC010327.5-201ENST00000586923 3061 ntBASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.39□□□□□ -0.43
LIN7CQ9NUP9 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms