Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 ALG1L5P-201ENST00000482043 771 ntBASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AC015910.1-201ENST00000579400 975 ntBASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AC007614.4-201ENST00000564048 1827 ntBASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.04□□□□□ -0.32
C12orf4Q9NQ89 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 BX640514.1-201ENST00000583223 1918 ntBASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 CEND1P1-201ENST00000451006 455 ntBASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AC105339.1-204ENST00000636249 355 ntBASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 INTS4P1-203ENST00000641008 3683 ntBASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 AC012508.2-201ENST00000567613 1472 ntBASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
C12orf4Q9NQ89 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
C12orf4Q9NQ89 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms