Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 FXNP2-201ENST00000411625 547 ntBASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 AC134698.3-201ENST00000523880 214 ntBASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 AC005324.6-201ENST00000587972 613 ntBASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 AC009955.4-201ENST00000597192 544 ntBASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 AC138696.2-201ENST00000607376 223 ntBASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 AL805961.1-203ENST00000641078 1258 ntBASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 AC068587.8-201ENST00000641239 219 ntBASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 INE2-201ENST00000630399 1874 ntBASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF3Q9HD45 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 SHC1P1-201ENST00000425230 1745 ntBASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 AL390755.1-201ENST00000623716 2027 ntBASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 AC009093.2-202ENST00000620513 2079 ntBASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF3Q9HD45 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 AC012618.1-201ENST00000461223 412 ntBASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 NUP210P1-202ENST00000504322 710 ntBASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 REXO1L4P-201ENST00000605109 1937 ntBASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF3Q9HD45 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 AC011840.2-201ENST00000563063 1520 ntBASIC14.82□□□□□ -0.04
TM9SF3Q9HD45 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms