Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RHOXF1P1-202ENST00000635473 501 ntBASIC15.71■□□□□ 0.11
CD248Q9HCU0 AC008687.7-202ENST00000637404 953 ntBASIC15.71■□□□□ 0.11
CD248Q9HCU0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD248Q9HCU0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.71■□□□□ 0.11
CD248Q9HCU0 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD248Q9HCU0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD248Q9HCU0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CD248Q9HCU0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD248Q9HCU0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.71■□□□□ 0.11
CD248Q9HCU0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD248Q9HCU0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD248Q9HCU0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.71■□□□□ 0.1
CD248Q9HCU0 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CD248Q9HCU0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CD248Q9HCU0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 AC079316.1-201ENST00000548397 411 ntBASIC15.7■□□□□ 0.1
CD248Q9HCU0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD248Q9HCU0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.7■□□□□ 0.1
CD248Q9HCU0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 AC105250.1-201ENST00000509378 2057 ntBASIC15.69■□□□□ 0.1
CD248Q9HCU0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.69■□□□□ 0.1
CD248Q9HCU0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 OR2I1P-209ENST00000641730 5365 ntBASIC15.69■□□□□ 0.1
CD248Q9HCU0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.69■□□□□ 0.1
CD248Q9HCU0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD248Q9HCU0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.68■□□□□ 0.1
CD248Q9HCU0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD248Q9HCU0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms