Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 AC233724.13-201ENST00000598383 410 ntBASIC14.17□□□□□ -0.14
BRF2Q9HAW0 AL022328.1-201ENST00000610050 478 ntBASIC14.17□□□□□ -0.14
BRF2Q9HAW0 AL358472.5-202ENST00000641448 1267 ntBASIC14.17□□□□□ -0.14
BRF2Q9HAW0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.17□□□□□ -0.14
BRF2Q9HAW0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 AC016397.2-201ENST00000624848 1985 ntBASIC14.16□□□□□ -0.14
BRF2Q9HAW0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 TCAM1P-207ENST00000485295 1537 ntBASIC14.16□□□□□ -0.14
BRF2Q9HAW0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.16□□□□□ -0.14
BRF2Q9HAW0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 AC020910.6-201ENST00000623084 1459 ntBASIC14.16□□□□□ -0.14
BRF2Q9HAW0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BRF2Q9HAW0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BRF2Q9HAW0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms