Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 CR383656.2-201ENST00000548656 2254 ntBASIC17.27■□□□□ 0.36
EFCC1Q9HA90 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 AC009779.1-201ENST00000551138 283 ntBASIC17.27■□□□□ 0.36
EFCC1Q9HA90 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.27■□□□□ 0.36
EFCC1Q9HA90 AC127024.7-201ENST00000625101 200 ntBASIC17.27■□□□□ 0.36
EFCC1Q9HA90 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EFCC1Q9HA90 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.27■□□□□ 0.35
EFCC1Q9HA90 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
EFCC1Q9HA90 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.27■□□□□ 0.35
EFCC1Q9HA90 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EFCC1Q9HA90 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EFCC1Q9HA90 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
EFCC1Q9HA90 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EFCC1Q9HA90 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
EFCC1Q9HA90 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 AL360270.3-201ENST00000609118 1348 ntBASIC17.26■□□□□ 0.35
EFCC1Q9HA90 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 RN7SKP175-201ENST00000408472 289 ntBASIC17.26■□□□□ 0.35
EFCC1Q9HA90 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 AC012362.1-201ENST00000434906 739 ntBASIC17.26■□□□□ 0.35
EFCC1Q9HA90 AC010234.1-201ENST00000494599 870 ntBASIC17.26■□□□□ 0.35
EFCC1Q9HA90 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 AC138894.2-201ENST00000602838 371 ntBASIC17.26■□□□□ 0.35
EFCC1Q9HA90 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 AC002472.3-201ENST00000640124 621 ntBASIC17.26■□□□□ 0.35
EFCC1Q9HA90 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFCC1Q9HA90 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms