Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 AC072061.1-201ENST00000569710 2234 ntBASIC12.06□□□□□ -0.48
NKX6-2Q9C056 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NKX6-2Q9C056 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.05□□□□□ -0.48
NKX6-2Q9C056 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 AC011498.7-201ENST00000624986 2027 ntBASIC12.05□□□□□ -0.48
NKX6-2Q9C056 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.05□□□□□ -0.48
NKX6-2Q9C056 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 AC108073.2-201ENST00000464002 357 ntBASIC12.05□□□□□ -0.48
NKX6-2Q9C056 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 SPTSSB-204ENST00000617024 1292 ntBASIC12.05□□□□□ -0.48
NKX6-2Q9C056 AC008735.5-201ENST00000623544 497 ntBASIC12.05□□□□□ -0.48
NKX6-2Q9C056 AC004790.2-201ENST00000623588 572 ntBASIC12.05□□□□□ -0.48
NKX6-2Q9C056 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX6-2Q9C056 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX6-2Q9C056 RPS2P28-201ENST00000314255 741 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms