Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRIM2Q9C040 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 KRT8P35-201ENST00000483942 1338 ntBASIC13.7□□□□□ -0.22
TRIM2Q9C040 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 AC132938.2-201ENST00000579188 680 ntBASIC13.7□□□□□ -0.22
TRIM2Q9C040 CLUHP6-201ENST00000580789 941 ntBASIC13.7□□□□□ -0.22
TRIM2Q9C040 CTBP2P3-201ENST00000585629 1255 ntBASIC13.7□□□□□ -0.22
TRIM2Q9C040 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 AL591163.1-201ENST00000641757 987 ntBASIC13.7□□□□□ -0.22
TRIM2Q9C040 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.7□□□□□ -0.22
TRIM2Q9C040 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRIM2Q9C040 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.69□□□□□ -0.22
TRIM2Q9C040 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 AC022137.2-201ENST00000503482 481 ntBASIC13.69□□□□□ -0.22
TRIM2Q9C040 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.69□□□□□ -0.22
TRIM2Q9C040 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRIM2Q9C040 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms